Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | BJD13_RS03585 | Not Available | Positive | 433302 - 434351 | 38948.1 |
| lipopolysaccharide biosynthesis protein | BJD13_RS03590 | Not Available | Positive | 434369 - 435859 | 53315.4 |
| glycosyltransferase | BJD13_RS03595 | Not Available | Positive | 435923 - 437119 | 44297.7 |
| polysaccharide pyruvyl transferase family protein | BJD13_RS03600 | Not Available | Positive | 437156 - 437950 | 29296.2 |
| wecb/taga/cpsf family glycosyltransferase | BJD13_RS03605 | Not Available | Positive | 437955 - 438749 | 28949.4 |
| cupin domain-containing protein | BJD13_RS03610 | Not Available | Positive | 438784 - 439245 | 16766.0 |
| trab/gumn family protein | BJD13_RS03615 | Not Available | Positive | 439337 - 440353 | 36884.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | BJD13_RS03620 | Not Available | Positive | 440554 - 441552 | 34360.2 |
| mbl fold metallo-hydrolase | BJD13_RS03625 | Not Available | Positive | 441552 - 442400 | 32366.7 |
| nad-dependent epimerase/dehydratase family protein | BJD13_RS03630 | Not Available | Positive | 442397 - 443356 | 35266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
