Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS24855 | Not Available | Negative | 4854968 - 4855327 | 13490.2 |
| nfed family protein | BJD13_RS23265 | Not Available | Positive | 4855382 - 4855663 | 9521.21 |
| energy transducer tonb | BJD13_RS23270 | Not Available | Negative | 4856006 - 4856881 | 31784.8 |
| glutathione synthase | BJD13_RS23275 | Not Available | Negative | 4856878 - 4857828 | 34382.5 |
| nfed family protein | BJD13_RS23280 | Not Available | Positive | 4858065 - 4858466 | 14539.8 |
| response regulator | BJD13_RS23285 | Not Available | Positive | 4858484 - 4858846 | 13284.0 |
| chemotaxis protein chew | BJD13_RS23290 | Not Available | Positive | 4858846 - 4859376 | 19952.9 |
| methyl-accepting chemotaxis protein | BJD13_RS23295 | Not Available | Positive | 4859416 - 4861452 | 71424.1 |
| hpt domain-containing protein | BJD13_RS23300 | Not Available | Positive | 4861566 - 4868783 | 256706.0 |
| chemotaxis protein cheb | BJD13_RS23305 | Not Available | Positive | 4868791 - 4869978 | 40777.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
