Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln domain-containing protein | BJD13_RS22110 | Not Available | Positive | 4574787 - 4575569 | 27687.9 |
| type 4a pilus biogenesis protein pilo | BJD13_RS22115 | Not Available | Positive | 4575566 - 4576231 | 24545.7 |
| pilus assembly protein pilp | BJD13_RS22120 | Not Available | Positive | 4576228 - 4576761 | 18974.8 |
| type iv pilus secretin pilq | BJD13_RS22125 | Not Available | Positive | 4576781 - 4578655 | 66385.3 |
| aaa family atpase | BJD13_RS22130 | Not Available | Positive | 4578774 - 4579829 | 39214.2 |
| duf58 domain-containing protein | BJD13_RS22135 | Not Available | Positive | 4579850 - 4580812 | 34123.8 |
| duf4381 domain-containing protein | BJD13_RS22140 | Not Available | Positive | 4580815 - 4581276 | 17504.3 |
| vwa domain-containing protein | BJD13_RS22145 | Not Available | Positive | 4581273 - 4582289 | 37428.4 |
| vwa domain-containing protein | BJD13_RS22150 | Not Available | Positive | 4582277 - 4584094 | 65381.9 |
| batd family protein | BJD13_RS22155 | Not Available | Positive | 4584091 - 4585839 | 61338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
