Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | BJD13_RS21850 | Not Available | Positive | 4518294 - 4518890 | 21937.5 |
| bestrophin family protein | BJD13_RS21855 | Not Available | Positive | 4519177 - 4520061 | 32658.0 |
| bifunctional deda family/phosphatase pap2 family protein | BJD13_RS21860 | Not Available | Negative | 4520474 - 4522561 | 76818.7 |
| serine/threonine-protein kinase | BJD13_RS21865 | Not Available | Positive | 4522713 - 4523372 | 25757.3 |
| sdr family oxidoreductase | BJD13_RS21870 | Not Available | Positive | 4523498 - 4524313 | 28066.1 |
| ion transporter | BJD13_RS21875 | Not Available | Negative | 4524454 - 4525326 | 32395.9 |
| acetylornithine transaminase | BJD13_RS21880 | Not Available | Positive | 4525399 - 4526625 | 42862.6 |
| had-ia family hydrolase | BJD13_RS21885 | Not Available | Negative | 4526811 - 4527428 | 22166.9 |
| tonb-dependent receptor | BJD13_RS21890 | Not Available | Positive | 4527714 - 4530008 | 83083.3 |
| flavin monoamine oxidase family protein | BJD13_RS21895 | Not Available | Positive | 4530078 - 4531685 | 58870.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
