Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | BJD13_RS21535 | Not Available | Negative | 4430477 - 4431127 | 22873.0 |
| pyridoxal phosphate-dependent aminotransferase | BJD13_RS21540 | Not Available | Negative | 4431127 - 4432398 | 46266.6 |
| ribosome small subunit-dependent gtpase a | BJD13_RS21545 | Not Available | Positive | 4432552 - 4433643 | 39155.5 |
| flavohemoglobin expression-modulating qegla motif protein | BJD13_RS21550 | Not Available | Positive | 4433643 - 4434905 | 45824.9 |
| type 1 glutamine amidotransferase domain-containing protein | BJD13_RS21555 | Not Available | Positive | 4435197 - 4435877 | 24354.7 |
| alpha-amylase family protein | BJD13_RS21560 | Not Available | Negative | 4436065 - 4437984 | 70037.8 |
| tonb-dependent receptor | BJD13_RS21565 | Not Available | Negative | 4438019 - 4440475 | 87931.7 |
| mfs transporter | BJD13_RS21570 | Not Available | Positive | 4440742 - 4442067 | 47985.7 |
| laci family dna-binding transcriptional regulator | BJD13_RS21575 | Not Available | Negative | 4442259 - 4443290 | 36936.3 |
| acetoacetyl-coa reductase | BJD13_RS21580 | Not Available | Negative | 4443531 - 4444271 | 25868.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
