Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS21420 | Not Available | Positive | 4402719 - 4403195 | 16731.0 |
| udp-forming cellulose synthase catalytic subunit | BJD13_RS21425 | Not Available | Positive | 4403280 - 4405424 | 79335.9 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | BJD13_RS21430 | Not Available | Positive | 4405469 - 4407793 | 83360.4 |
| cellulose synthase complex periplasmic endoglucanase bcsz | BJD13_RS21435 | Not Available | Positive | 4407790 - 4408971 | 42345.7 |
| cellulose biosynthesis protein bcsc | BJD13_RS21440 | Not Available | Positive | 4408953 - 4413482 | 159486.0 |
| pa domain-containing protein | BJD13_RS21450 | Not Available | Negative | 4413715 - 4415373 | 56948.6 |
| post-pep-cterm-1 domain-containing protein | BJD13_RS21455 | Not Available | Negative | 4415366 - 4415791 | 14515.0 |
| arsenate reductase (glutaredoxin) | BJD13_RS21460 | Not Available | Positive | 4416137 - 4416559 | 15358.6 |
| peptide deformylase | BJD13_RS21470 | Not Available | Positive | 4416895 - 4417410 | 19180.0 |
| degv family protein | BJD13_RS21475 | Not Available | Negative | 4417618 - 4418562 | 34243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
