Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuob/complex i 20 kda subunit family protein | BJD13_RS03130 | Not Available | Positive | 332272 - 332826 | 20375.9 |
| nadh-quinone oxidoreductase subunit c | BJD13_RS03135 | Not Available | Positive | 332863 - 333615 | 27834.5 |
| nadh-quinone oxidoreductase subunit d | BJD13_RS03140 | Not Available | Positive | 333612 - 334919 | 49448.4 |
| nadh-quinone oxidoreductase subunit nuoe | BJD13_RS03145 | Not Available | Positive | 334916 - 335443 | 19595.3 |
| nadh-quinone oxidoreductase subunit nuof | BJD13_RS03150 | Not Available | Positive | 335447 - 336781 | 48165.6 |
| nadh-quinone oxidoreductase subunit nuog | BJD13_RS03155 | Not Available | Positive | 336778 - 339012 | 79269.1 |
| nadh-quinone oxidoreductase subunit nuoh | BJD13_RS03160 | Not Available | Positive | 339009 - 340100 | 40465.3 |
| nadh-quinone oxidoreductase subunit nuoi | BJD13_RS03165 | Not Available | Positive | 340104 - 340592 | 18782.9 |
| nadh-quinone oxidoreductase subunit j | BJD13_RS03170 | Not Available | Positive | 340597 - 341259 | 23742.8 |
| nadh-quinone oxidoreductase subunit nuok | BJD13_RS03175 | Not Available | Positive | 341256 - 341561 | 10879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
