Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | BJD13_RS20175 | Not Available | Positive | 4129120 - 4130598 | 51852.6 |
| hypothetical protein | BJD13_RS20180 | Not Available | Negative | 4130551 - 4130796 | 8668.28 |
| hypothetical protein | BJD13_RS20185 | Not Available | Positive | 4130994 - 4131176 | 6542.88 |
| duf1653 domain-containing protein | BJD13_RS20190 | Not Available | Positive | 4131459 - 4131689 | 8776.65 |
| hypothetical protein | BJD13_RS20195 | Not Available | Positive | 4131744 - 4132115 | 13278.7 |
| ycii family protein | BJD13_RS20200 | Not Available | Negative | 4132184 - 4132468 | 10146.4 |
| fmn-dependent nadh-azoreductase | BJD13_RS20205 | Not Available | Negative | 4132472 - 4133134 | 23273.8 |
| lysr family transcriptional regulator | BJD13_RS20210 | Not Available | Positive | 4133267 - 4134193 | 33267.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4134254 - 4134330 | Not Available |
| alpha/beta fold hydrolase | BJD13_RS20220 | Not Available | Negative | 4134382 - 4135167 | 27151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
