Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine aminopropyltransferase | BJD13_RS19215 | Not Available | Negative | 3933660 - 3934517 | 31509.3 |
| arginine decarboxylase | BJD13_RS19220 | Not Available | Positive | 3934755 - 3936641 | 68896.7 |
| hypothetical protein | BJD13_RS24765 | Not Available | Positive | 3936779 - 3936949 | 6270.54 |
| non-ribosomal peptide synthetase | BJD13_RS19225 | Not Available | Positive | 3937513 - 3941517 | 146379.0 |
| glycosyltransferase | BJD13_RS19230 | Not Available | Positive | 3941510 - 3942841 | 47163.0 |
| acyltransferase family protein | BJD13_RS19235 | Not Available | Positive | 3942979 - 3944106 | 41885.7 |
| sdr family nad(p)-dependent oxidoreductase | BJD13_RS19240 | Not Available | Negative | 3944354 - 3945109 | 26408.6 |
| hypothetical protein | BJD13_RS19245 | Not Available | Negative | 3945146 - 3945679 | 18775.5 |
| spor domain-containing protein | BJD13_RS19250 | Not Available | Negative | 3945686 - 3946570 | 29440.8 |
| arginine--trna ligase | BJD13_RS19255 | Not Available | Negative | 3946750 - 3948438 | 61791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
