Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine biosynthesis protein hisie | BJD13_RS19065 | Not Available | Positive | 3904426 - 3905277 | 28810.0 |
| duf3313 domain-containing protein | BJD13_RS19070 | Not Available | Negative | 3905556 - 3906218 | 23901.6 |
| hypothetical protein | BJD13_RS19075 | Not Available | Negative | 3906283 - 3906573 | 10295.5 |
| atp-binding protein | BJD13_RS19080 | Not Available | Negative | 3906950 - 3908134 | 41929.5 |
| response regulator transcription factor | BJD13_RS19085 | Not Available | Negative | 3908131 - 3908796 | 24272.4 |
| tigr01777 family oxidoreductase | BJD13_RS19090 | Not Available | Negative | 3908943 - 3909830 | 31869.5 |
| duf4142 domain-containing protein | BJD13_RS19095 | Not Available | Negative | 3910037 - 3910630 | 20518.3 |
| hypothetical protein | BJD13_RS19100 | Not Available | Negative | 3910706 - 3910981 | 10079.2 |
| hypothetical protein | BJD13_RS19105 | Not Available | Negative | 3911025 - 3911306 | 10615.4 |
| hypothetical protein | BJD13_RS25075 | Not Available | Positive | 3911711 - 3911875 | 6048.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
