Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent peptidase | BJD13_RS18855 | Not Available | Negative | 3867151 - 3867906 | 28302.7 |
| hypothetical protein | BJD13_RS18860 | Not Available | Negative | 3867915 - 3868229 | 11259.6 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | BJD13_RS18870 | Not Available | Positive | 3868534 - 3869550 | 34768.9 |
| type iii pantothenate kinase | BJD13_RS18875 | Not Available | Positive | 3869547 - 3870275 | 25029.1 |
| spor domain-containing protein | BJD13_RS18880 | Not Available | Positive | 3870285 - 3871196 | 29934.3 |
| Trna-thr | Not Available | Not Available | Positive | 3871229 - 3871304 | Not Available |
| dtmp kinase | BJD13_RS18890 | Not Available | Negative | 3871607 - 3872287 | 23976.7 |
| gtp-binding protein | BJD13_RS18895 | Not Available | Negative | 3872756 - 3873298 | 19578.6 |
| hypothetical protein | BJD13_RS18900 | Not Available | Negative | 3873295 - 3874212 | 32700.7 |
| hypothetical protein | BJD13_RS18905 | Not Available | Negative | 3874309 - 3874668 | 12948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
