Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | BJD13_RS18690 | Not Available | Positive | 3828756 - 3829502 | 26607.1 |
| abc transporter permease | BJD13_RS18695 | Not Available | Positive | 3829499 - 3830692 | 43359.9 |
| energy transducer tonb | BJD13_RS18700 | Not Available | Negative | 3830832 - 3831842 | 35619.1 |
| tryptophan halogenase family protein | BJD13_RS18705 | Not Available | Negative | 3831982 - 3833547 | 57961.1 |
| cupin-like domain-containing protein | BJD13_RS18710 | Not Available | Negative | 3833558 - 3834571 | 37302.7 |
| sapc family protein | BJD13_RS18715 | Not Available | Negative | 3834561 - 3835262 | 26264.5 |
| tonb-dependent receptor | BJD13_RS18720 | Not Available | Negative | 3835449 - 3838463 | 108905.0 |
| glutathione binding-like protein | BJD13_RS18725 | Not Available | Positive | 3838847 - 3839536 | 25685.7 |
| s9 family peptidase | BJD13_RS18730 | Not Available | Positive | 3839869 - 3842121 | 82609.9 |
| hypothetical protein | BJD13_RS18735 | Not Available | Negative | 3842363 - 3842734 | 13653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
