Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | BJD13_RS18525 | Not Available | Negative | 3791995 - 3792816 | 29871.9 |
| beta-ketoacyl synthase chain length factor | BJD13_RS18530 | Not Available | Negative | 3792813 - 3793586 | 25997.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | BJD13_RS18535 | Not Available | Negative | 3793586 - 3794785 | 41374.0 |
| ycgl domain-containing protein | BJD13_RS18540 | Not Available | Positive | 3795005 - 3795265 | 9534.4 |
| ankyrin repeat domain-containing protein | BJD13_RS18545 | Not Available | Positive | 3795258 - 3798578 | 116150.0 |
| nfed family protein | BJD13_RS25455 | Not Available | Positive | 3798605 - 3798903 | 10773.9 |
| glycoside hydrolase family 15 protein | BJD13_RS18550 | Not Available | Positive | 3798967 - 3800766 | 66867.0 |
| glucose-6-phosphate dehydrogenase | BJD13_RS18555 | Not Available | Positive | 3800763 - 3802613 | 68183.3 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | BJD13_RS18560 | Not Available | Negative | 3802718 - 3804529 | 65065.6 |
| carbonic anhydrase | BJD13_RS18570 | Not Available | Negative | 3804746 - 3805573 | 30086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
