Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lola-related protein | BJD13_RS18475 | Not Available | Positive | 3784282 - 3784929 | 23127.9 |
| hypothetical protein | BJD13_RS18480 | Not Available | Positive | 3785014 - 3785295 | 9930.18 |
| hypothetical protein | BJD13_RS18485 | Not Available | Positive | 3785285 - 3785512 | 7898.65 |
| mmpl family transporter | BJD13_RS18490 | Not Available | Positive | 3785502 - 3787868 | 83713.6 |
| hotdog family protein | BJD13_RS18495 | Not Available | Positive | 3787855 - 3788286 | 15812.2 |
| hypothetical protein | BJD13_RS18500 | Not Available | Negative | 3788296 - 3788835 | 19972.0 |
| 3-oxoacyl-acp reductase fabg | BJD13_RS18505 | Not Available | Positive | 3789018 - 3789749 | 24803.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3789811 - 3789886 | Not Available |
| hypothetical protein | BJD13_RS18515 | Not Available | Negative | 3789890 - 3790351 | 16664.0 |
| nad(p)/fad-dependent oxidoreductase | BJD13_RS18520 | Not Available | Negative | 3790376 - 3791998 | 60764.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
