Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS18420 | Not Available | Negative | 3772885 - 3773601 | 25887.6 |
| s9 family peptidase | BJD13_RS18425 | Not Available | Negative | 3774032 - 3776392 | 87937.1 |
| amp-binding protein | BJD13_RS18435 | Not Available | Positive | 3776989 - 3778332 | 47288.6 |
| hypothetical protein | BJD13_RS18440 | Not Available | Negative | 3778638 - 3779645 | 36508.2 |
| nad(p)/fad-dependent oxidoreductase | BJD13_RS18445 | Not Available | Negative | 3779642 - 3780991 | 49936.1 |
| xanthomonadin biosynthesis acyl carrier protein xanc | BJD13_RS18450 | Not Available | Positive | 3781295 - 3781564 | 9755.44 |
| hypothetical protein | BJD13_RS18455 | Not Available | Positive | 3781602 - 3782285 | 24976.3 |
| lysophospholipid acyltransferase family protein | BJD13_RS18460 | Not Available | Positive | 3782339 - 3783088 | 27334.0 |
| hypothetical protein | BJD13_RS18465 | Not Available | Positive | 3783160 - 3783387 | 8021.88 |
| acyltransferase | BJD13_RS18470 | Not Available | Positive | 3783384 - 3784358 | 36207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
