Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | BJD13_RS18160 | Not Available | Positive | 3700036 - 3701454 | 52928.3 |
| voc family protein | BJD13_RS18165 | Not Available | Negative | 3701465 - 3701860 | 14598.6 |
| fad/nad(p)-binding protein | BJD13_RS18170 | Not Available | Positive | 3702030 - 3703433 | 49886.7 |
| dna helicase ii | BJD13_RS18175 | Not Available | Positive | 3703758 - 3705944 | 81603.6 |
| hypothetical protein | BJD13_RS18180 | Not Available | Negative | 3706127 - 3706351 | 8277.97 |
| sugar o-acetyltransferase | BJD13_RS18185 | Not Available | Positive | 3706801 - 3707382 | 20124.9 |
| universal stress protein | BJD13_RS18190 | Not Available | Positive | 3707633 - 3708079 | 16235.8 |
| transcriptional regulator tagk | BJD13_RS18195 | Not Available | Negative | 3708176 - 3708847 | 25277.3 |
| type vi secretion system contractile sheath small subunit | BJD13_RS18200 | Not Available | Positive | 3709161 - 3709670 | 18280.8 |
| type vi secretion system contractile sheath large subunit | BJD13_RS18205 | Not Available | Positive | 3709675 - 3711168 | 55233.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
