Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | BJD13_RS17660 | Not Available | Positive | 3576629 - 3577375 | 27318.2 |
| kelch repeat-containing protein | BJD13_RS17665 | Not Available | Negative | 3577508 - 3578530 | 36488.7 |
| hypothetical protein | BJD13_RS17670 | Not Available | Negative | 3579083 - 3579616 | 19121.6 |
| duf2256 domain-containing protein | BJD13_RS17675 | Not Available | Negative | 3579841 - 3579999 | 6397.71 |
| hypothetical protein | BJD13_RS17680 | Not Available | Positive | 3580238 - 3580648 | 14990.8 |
| bleomycin resistance protein | BJD13_RS17685 | Not Available | Positive | 3580757 - 3581146 | 13826.5 |
| mannitol dehydrogenase family protein | BJD13_RS17690 | Not Available | Negative | 3581228 - 3582700 | 53207.7 |
| glycoside hydrolase family 3 protein | BJD13_RS17695 | Not Available | Negative | 3582849 - 3585557 | 98439.4 |
| glycoside hydrolase family 43 protein | BJD13_RS17700 | Not Available | Negative | 3585560 - 3587230 | 60722.0 |
| d-mannonate dehydratase mand | BJD13_RS17705 | Not Available | Negative | 3587254 - 3588513 | 46761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
