Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase family protein | BJD13_RS16195 | Not Available | Negative | 3227763 - 3228257 | 17298.1 |
| 1,4-alpha-glucan branching protein glgb | BJD13_RS16200 | Not Available | Negative | 3228450 - 3230633 | 80330.6 |
| maltose alpha-d-glucosyltransferase | BJD13_RS16205 | Not Available | Negative | 3230645 - 3233995 | 125578.0 |
| maltotransferase domain-containing protein | BJD13_RS16210 | Not Available | Negative | 3233992 - 3237108 | 115630.0 |
| marr family winged helix-turn-helix transcriptional regulator | BJD13_RS16215 | Not Available | Positive | 3237974 - 3238462 | 17319.0 |
| sdr family oxidoreductase | BJD13_RS16220 | Not Available | Positive | 3238470 - 3239327 | 31092.5 |
| hypothetical protein | BJD13_RS16225 | Not Available | Negative | 3239443 - 3240153 | 26007.9 |
| nfed family protein | BJD13_RS16230 | Not Available | Negative | 3240395 - 3240594 | 7166.25 |
| duf4279 domain-containing protein | BJD13_RS16235 | Not Available | Negative | 3240700 - 3241110 | 14771.6 |
| hypothetical protein | BJD13_RS16240 | Not Available | Negative | 3241175 - 3241684 | 18487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
