Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS15980 | Not Available | Negative | 3181099 - 3181332 | 7987.92 |
| yhet family hydrolase | BJD13_RS15985 | Not Available | Negative | 3181353 - 3182342 | 36579.8 |
| lysophospholipid acyltransferase family protein | BJD13_RS15990 | Not Available | Negative | 3182402 - 3183301 | 33195.9 |
| hotdog fold thioesterase | BJD13_RS15995 | Not Available | Negative | 3183323 - 3183751 | 15003.0 |
| phospholipase d family protein | BJD13_RS16000 | Not Available | Negative | 3184083 - 3186101 | 74049.5 |
| ycei family protein | BJD13_RS16005 | Not Available | Negative | 3186098 - 3186670 | 21847.3 |
| sixa phosphatase family protein | BJD13_RS16010 | Not Available | Negative | 3186674 - 3187150 | 17558.0 |
| para family protein | BJD13_RS16015 | Not Available | Negative | 3187166 - 3187798 | 22793.3 |
| aec family transporter | BJD13_RS16025 | Not Available | Negative | 3188122 - 3189039 | 33007.0 |
| hypothetical protein | BJD13_RS16035 | Not Available | Negative | 3189872 - 3190507 | 23304.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
