Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS15370 | Not Available | Negative | 3052618 - 3053496 | 32058.0 |
| voc family protein | BJD13_RS15375 | Not Available | Positive | 3053829 - 3054497 | 24461.2 |
| tatd family hydrolase | BJD13_RS15380 | Not Available | Negative | 3054635 - 3055447 | 30121.8 |
| lysr family transcriptional regulator | BJD13_RS15385 | Not Available | Negative | 3055659 - 3056576 | 33361.9 |
| aromatic ring-hydroxylating oxygenase subunit alpha | BJD13_RS15390 | Not Available | Positive | 3056702 - 3057754 | 38759.3 |
| pdr/vanb family oxidoreductase | BJD13_RS15395 | Not Available | Positive | 3057772 - 3058728 | 34483.1 |
| ncs2 family permease | BJD13_RS15405 | Not Available | Positive | 3059094 - 3060407 | 45226.6 |
| adenosine deaminase family protein | BJD13_RS15410 | Not Available | Positive | 3060535 - 3062085 | 56592.9 |
| nucleoside hydrolase | BJD13_RS15415 | Not Available | Positive | 3062236 - 3063378 | 41846.9 |
| atze family amidohydrolase | BJD13_RS15420 | Not Available | Positive | 3063817 - 3065277 | 50223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
