Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS15215 | Not Available | Positive | 3019761 - 3020195 | 16417.6 |
| mapeg family protein | BJD13_RS15220 | Not Available | Positive | 3020397 - 3020759 | 12771.9 |
| hypothetical protein | BJD13_RS15225 | Not Available | Positive | 3020784 - 3021179 | 14603.3 |
| hypothetical protein | BJD13_RS15235 | Not Available | Positive | 3021669 - 3021944 | 9750.89 |
| winged helix-turn-helix transcriptional regulator | BJD13_RS15240 | Not Available | Negative | 3022138 - 3022569 | 15693.2 |
| sdr family oxidoreductase | BJD13_RS15245 | Not Available | Positive | 3022706 - 3023584 | 29880.3 |
| opro/oprp family phosphate-selective porin | BJD13_RS15250 | Not Available | Positive | 3024421 - 3025878 | 52941.4 |
| 2-keto-3-deoxygluconate transporter | BJD13_RS15255 | Not Available | Positive | 3026032 - 3026988 | 31850.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3027203 - 3027279 | Not Available |
| methionine synthase | BJD13_RS15265 | Not Available | Negative | 3027340 - 3028368 | 38291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
