Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2934 domain-containing protein | BJD13_RS14670 | Not Available | Negative | 2905538 - 2905723 | 6946.02 |
| malto-oligosyltrehalose synthase | BJD13_RS14675 | Not Available | Negative | 2905745 - 2908354 | 96032.3 |
| 4-alpha-glucanotransferase | BJD13_RS14680 | Not Available | Negative | 2908351 - 2910300 | 69542.0 |
| malto-oligosyltrehalose trehalohydrolase | BJD13_RS14685 | Not Available | Negative | 2910297 - 2912054 | 63900.9 |
| 1,4-alpha-glucan branching enzyme | BJD13_RS14690 | Not Available | Negative | 2912057 - 2914288 | 81694.4 |
| glycogen synthase glga | BJD13_RS14695 | Not Available | Negative | 2914285 - 2915868 | 56862.9 |
| ggdef domain-containing protein | BJD13_RS14700 | Not Available | Positive | 2916356 - 2917984 | 59268.6 |
| duf808 domain-containing protein | BJD13_RS14705 | Not Available | Negative | 2918071 - 2919012 | 32723.9 |
| abc1 kinase family protein | BJD13_RS14715 | Not Available | Positive | 2919256 - 2920974 | 63418.2 |
| phosphoglycerol transferase i | BJD13_RS14725 | Not Available | Positive | 2921664 - 2923772 | 77715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
