Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | BJD13_RS14405 | Not Available | Negative | 2846755 - 2847387 | 22547.8 |
| anthranilate synthase component ii | BJD13_RS14410 | Not Available | Negative | 2847530 - 2848108 | 21087.4 |
| simpl domain-containing protein | BJD13_RS14415 | Not Available | Negative | 2848119 - 2848901 | 27579.9 |
| threonine aldolase family protein | BJD13_RS14420 | Not Available | Negative | 2848920 - 2849996 | 38166.4 |
| anthranilate synthase component i | BJD13_RS14425 | Not Available | Negative | 2849996 - 2851471 | 54304.7 |
| lipid kinase yegs | BJD13_RS14430 | Not Available | Negative | 2851729 - 2852658 | 32546.9 |
| gnat family n-acetyltransferase | BJD13_RS14435 | Not Available | Negative | 2852894 - 2853385 | 17892.3 |
| ribulose-phosphate 3-epimerase | BJD13_RS14440 | Not Available | Negative | 2853382 - 2854083 | 24902.2 |
| j domain-containing protein | BJD13_RS14445 | Not Available | Negative | 2854209 - 2854538 | 12115.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BJD13_RS14450 | Not Available | Positive | 2854748 - 2855674 | 34453.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
