Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | BJD13_RS14250 | Not Available | Positive | 2816508 - 2817803 | 44915.9 |
| yccs family putative transporter | BJD13_RS14255 | Not Available | Positive | 2818012 - 2820225 | 81074.8 |
| mfs transporter | BJD13_RS14260 | Not Available | Negative | 2820357 - 2821547 | 40836.6 |
| lysr family transcriptional regulator | BJD13_RS14265 | Not Available | Positive | 2821645 - 2822547 | 32504.6 |
| mfs transporter | BJD13_RS14270 | Not Available | Positive | 2822616 - 2824538 | 69493.7 |
| cd225/dispanin family protein | BJD13_RS14275 | Not Available | Positive | 2825001 - 2825345 | 11909.8 |
| duf2752 domain-containing protein | BJD13_RS14280 | Not Available | Positive | 2825345 - 2825755 | 15014.6 |
| regulatory signaling modulator protein ampe | BJD13_RS14285 | Not Available | Negative | 2825835 - 2826725 | 33114.6 |
| nad(+) diphosphatase | BJD13_RS14290 | Not Available | Negative | 2826799 - 2827689 | 31884.9 |
| lipase family protein | BJD13_RS14295 | Not Available | Negative | 2827999 - 2829261 | 45000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
