Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | BJD13_RS14200 | Not Available | Negative | 2805978 - 2806952 | 36031.9 |
| lysophospholipid acyltransferase family protein | BJD13_RS14205 | Not Available | Negative | 2806949 - 2807581 | 23451.4 |
| cdp-alcohol phosphatidyltransferase family protein | BJD13_RS14210 | Not Available | Negative | 2807578 - 2808216 | 22782.6 |
| tigr04222 domain-containing membrane protein | BJD13_RS14215 | Not Available | Negative | 2808216 - 2809712 | 53927.5 |
| hypothetical protein | BJD13_RS14220 | Not Available | Negative | 2809709 - 2810155 | 15815.9 |
| phosphatase pap2/dual specificity phosphatase family protein | BJD13_RS14225 | Not Available | Negative | 2810152 - 2811489 | 49159.1 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | BJD13_RS14230 | Not Available | Negative | 2811486 - 2813246 | 64378.2 |
| cdp-alcohol phosphatidyltransferase family protein | BJD13_RS14235 | Not Available | Negative | 2813331 - 2813948 | 21505.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BJD13_RS14240 | Not Available | Positive | 2814022 - 2815605 | 55762.7 |
| hypothetical protein | BJD13_RS14245 | Not Available | Positive | 2815630 - 2816475 | 29633.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
