Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2145 domain-containing protein | BJD13_RS14035 | Not Available | Positive | 2765934 - 2766803 | 31403.2 |
| hypothetical protein | BJD13_RS14040 | Not Available | Positive | 2766800 - 2767309 | 17545.7 |
| protease pro-enzyme activation domain-containing protein | BJD13_RS14045 | Not Available | Negative | 2767418 - 2769379 | 68197.2 |
| vut family protein | BJD13_RS14055 | Not Available | Positive | 2770161 - 2770712 | 19957.6 |
| bifunctional | BJD13_RS14060 | Not Available | Negative | 2770816 - 2773641 | 102552.0 |
| hypothetical protein | BJD13_RS14065 | Not Available | Positive | 2773804 - 2774322 | 18456.8 |
| smp-30/gluconolactonase/lre family protein | BJD13_RS14070 | Not Available | Positive | 2774322 - 2775242 | 33433.3 |
| hypothetical protein | BJD13_RS14075 | Not Available | Negative | 2775663 - 2778113 | 89274.0 |
| hypothetical protein | BJD13_RS14080 | Not Available | Negative | 2778207 - 2780384 | 79500.4 |
| 3-deoxy-7-phosphoheptulonate synthase | BJD13_RS14085 | Not Available | Negative | 2781178 - 2782251 | 38323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
