Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS25550 | Not Available | Positive | 167892 - 168017 | 4430.32 |
| lysr family transcriptional regulator | BJD13_RS02395 | Not Available | Negative | 168079 - 168978 | 32800.6 |
| cupin domain-containing protein | BJD13_RS02400 | Not Available | Positive | 169179 - 169649 | 16364.4 |
| arac family transcriptional regulator | BJD13_RS02405 | Not Available | Negative | 169758 - 170666 | 33232.3 |
| hypothetical protein | BJD13_RS02410 | Not Available | Positive | 170891 - 171094 | 7490.15 |
| lysr family transcriptional regulator | BJD13_RS02415 | Not Available | Negative | 171415 - 172329 | 33918.8 |
| mfs transporter | BJD13_RS02420 | Not Available | Positive | 172429 - 173646 | 40884.3 |
| aldo/keto reductase | BJD13_RS02425 | Not Available | Positive | 173803 - 174834 | 37528.7 |
| hypothetical protein | BJD13_RS02430 | Not Available | Negative | 174917 - 175513 | 20245.4 |
| s8 family serine peptidase | BJD13_RS02435 | Not Available | Negative | 175515 - 177335 | 64546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
