Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | BJD13_RS12735 | Not Available | Negative | 2483946 - 2485184 | 42706.0 |
| cell division protein ftsa | BJD13_RS12740 | Not Available | Negative | 2485492 - 2486727 | 43997.2 |
| cell division protein ftsq/divib | BJD13_RS12745 | Not Available | Negative | 2486724 - 2487551 | 30642.1 |
| d-alanine--d-alanine ligase | BJD13_RS12750 | Not Available | Negative | 2487658 - 2488614 | 33747.3 |
| udp-n-acetylmuramate--l-alanine ligase | BJD13_RS12755 | Not Available | Negative | 2488611 - 2490044 | 50665.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BJD13_RS12760 | Not Available | Negative | 2490041 - 2491333 | 44331.9 |
| putative lipid ii flippase ftsw | BJD13_RS12765 | Not Available | Negative | 2491330 - 2492706 | 49377.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BJD13_RS12770 | Not Available | Negative | 2492706 - 2493791 | 39629.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BJD13_RS12775 | Not Available | Negative | 2493781 - 2495292 | 51878.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BJD13_RS12780 | Not Available | Negative | 2495289 - 2496764 | 51070.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
