Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | BJD13_RS12425 | Not Available | Negative | 2410244 - 2410738 | 18038.7 |
| hypothetical protein | BJD13_RS12430 | Not Available | Negative | 2410740 - 2411252 | 18375.1 |
| thymidylate synthase | BJD13_RS12435 | Not Available | Negative | 2411313 - 2412107 | 30202.1 |
| prolipoprotein diacylglyceryl transferase | BJD13_RS12440 | Not Available | Negative | 2412104 - 2412994 | 32745.8 |
| tpm domain-containing protein | BJD13_RS12445 | Not Available | Negative | 2413049 - 2413540 | 18182.6 |
| tpm domain-containing protein | BJD13_RS12450 | Not Available | Negative | 2413540 - 2414436 | 29906.5 |
| lema family protein | BJD13_RS12455 | Not Available | Negative | 2414780 - 2415418 | 23773.1 |
| diacylglycerol kinase | BJD13_RS12460 | Not Available | Negative | 2415515 - 2415895 | 13873.5 |
| sgnh/gdsl hydrolase family protein | BJD13_RS12465 | Not Available | Positive | 2416077 - 2416778 | 25936.2 |
| sensor histidine kinase | BJD13_RS12470 | Not Available | Negative | 2417197 - 2418468 | 46921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
