Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chea | BJD13_RS02295 | Not Available | Negative | 141505 - 143514 | 71352.4 |
| lipid asymmetry maintenance protein mlab | BJD13_RS02300 | Not Available | Negative | 143533 - 143862 | 11547.2 |
| transcription-repair coupling factor | BJD13_RS02305 | Not Available | Negative | 144334 - 147798 | 127622.0 |
| gnat family n-acetyltransferase | BJD13_RS02310 | Not Available | Negative | 148213 - 148755 | 19977.5 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | BJD13_RS02315 | Not Available | Negative | 149126 - 150034 | 33428.4 |
| two-component system response regulator creb | BJD13_RS02320 | Not Available | Positive | 150213 - 150917 | 25797.0 |
| two-component system sensor histidine kinase crec | BJD13_RS02325 | Not Available | Positive | 150966 - 152414 | 52662.3 |
| c1 family peptidase | BJD13_RS02330 | Not Available | Negative | 152539 - 153351 | 28660.6 |
| cell envelope integrity protein cred | BJD13_RS02335 | Not Available | Positive | 153772 - 155091 | 48453.2 |
| hypothetical protein | BJD13_RS02340 | Not Available | Positive | 155099 - 155521 | 15462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
