Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l24 | BJD13_RS11810 | Not Available | Negative | 2295888 - 2296205 | 11240.5 |
| 50s ribosomal protein l14 | BJD13_RS11815 | Not Available | Negative | 2296221 - 2296589 | 13524.8 |
| 30s ribosomal protein s17 | BJD13_RS11820 | Not Available | Negative | 2296604 - 2296873 | 10126.1 |
| 50s ribosomal protein l29 | BJD13_RS11825 | Not Available | Negative | 2296885 - 2297070 | 7237.88 |
| 50s ribosomal protein l16 | BJD13_RS11830 | Not Available | Negative | 2297070 - 2297483 | 15500.0 |
| 30s ribosomal protein s3 | BJD13_RS11835 | Not Available | Negative | 2297489 - 2298223 | 27467.2 |
| 50s ribosomal protein l22 | BJD13_RS11840 | Not Available | Negative | 2298241 - 2298576 | 12073.9 |
| 30s ribosomal protein s19 | BJD13_RS11845 | Not Available | Negative | 2298589 - 2298858 | 9753.06 |
| 50s ribosomal protein l2 | BJD13_RS11850 | Not Available | Negative | 2298865 - 2299692 | 29900.3 |
| 50s ribosomal protein l23 | BJD13_RS11855 | Not Available | Negative | 2299703 - 2300002 | 11017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
