Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic pyranopterin monophosphate synthase moac | BJD13_RS11285 | Not Available | Negative | 2194612 - 2195109 | 17511.3 |
| duf4440 domain-containing protein | BJD13_RS11290 | Not Available | Negative | 2195134 - 2195514 | 14182.9 |
| gtp 3',8-cyclase moaa | BJD13_RS11295 | Not Available | Negative | 2195511 - 2196542 | 37482.1 |
| mbl fold metallo-hydrolase | BJD13_RS11300 | Not Available | Negative | 2196542 - 2197291 | 27556.7 |
| 3-deoxy-d-manno-octulosonic acid kinase | BJD13_RS11305 | Not Available | Negative | 2197291 - 2198040 | 28437.0 |
| glycosyltransferase family 9 protein | BJD13_RS11310 | Not Available | Positive | 2198061 - 2199110 | 38519.4 |
| duf6165 family protein | BJD13_RS11315 | Not Available | Negative | 2199482 - 2199886 | 15279.2 |
| helix-turn-helix domain-containing protein | BJD13_RS11320 | Not Available | Negative | 2200271 - 2200606 | 12122.8 |
| hypothetical protein | BJD13_RS11325 | Not Available | Positive | 2200741 - 2201484 | 27126.1 |
| hypothetical protein | BJD13_RS11330 | Not Available | Positive | 2201496 - 2201891 | 14156.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
