Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | BJD13_RS10870 | Not Available | Negative | 2104774 - 2107446 | 96983.6 |
| adenylosuccinate synthase | BJD13_RS10875 | Not Available | Negative | 2107822 - 2109114 | 46202.4 |
| rep-associated tyrosine transposase | BJD13_RS10880 | Not Available | Negative | 2109648 - 2110112 | 17147.3 |
| protease modulator hflc | BJD13_RS10885 | Not Available | Negative | 2110363 - 2111226 | 31912.2 |
| ftsh protease activity modulator hflk | BJD13_RS10890 | Not Available | Negative | 2111226 - 2112353 | 40592.2 |
| twitching motility response regulator pilh | BJD13_RS10895 | Not Available | Negative | 2113033 - 2113419 | 14301.3 |
| dnaj c-terminal domain-containing protein | BJD13_RS10900 | Not Available | Negative | 2113917 - 2114816 | 31701.3 |
| hsp20/alpha crystallin family protein | BJD13_RS10905 | Not Available | Negative | 2115228 - 2115704 | 17750.8 |
| peroxiredoxin | BJD13_RS10910 | Not Available | Positive | 2115867 - 2116349 | 17569.2 |
| ferritin-like domain-containing protein | BJD13_RS10915 | Not Available | Positive | 2116390 - 2116950 | 21145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
