Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xac0095 family protein | BJD13_RS10810 | Not Available | Negative | 2091549 - 2091815 | 10014.0 |
| type i restriction-modification system endonuclease | BJD13_RS10825 | Not Available | Positive | 2092392 - 2095865 | 130937.0 |
| fic family protein | BJD13_RS10830 | Not Available | Positive | 2095954 - 2097156 | 44127.3 |
| n-6 dna methylase | BJD13_RS10835 | Not Available | Positive | 2097153 - 2098697 | 56338.0 |
| restriction endonuclease subunit s | BJD13_RS10840 | Not Available | Positive | 2098678 - 2100060 | 50826.9 |
| duf262 domain-containing protein | BJD13_RS10845 | Not Available | Positive | 2100097 - 2101899 | 67640.1 |
| nfed family protein | BJD13_RS10850 | Not Available | Negative | 2102001 - 2102336 | 11969.7 |
| tetr/acrr family transcriptional regulator | BJD13_RS10855 | Not Available | Negative | 2102676 - 2103266 | 20799.6 |
| sdr family oxidoreductase | BJD13_RS10860 | Not Available | Positive | 2103338 - 2104051 | 24593.5 |
| hypothetical protein | BJD13_RS25405 | Not Available | Positive | 2104326 - 2104517 | 7181.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
