Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein cheb | BJD13_RS10185 | Not Available | Positive | 1945309 - 1945893 | 20030.3 |
| hybrid sensor histidine kinase/response regulator | BJD13_RS10190 | Not Available | Positive | 1945890 - 1947020 | 41076.3 |
| duf1428 domain-containing protein | BJD13_RS10195 | Not Available | Positive | 1947384 - 1947749 | 13557.2 |
| thioredoxin trxc | BJD13_RS10200 | Not Available | Positive | 1947923 - 1948369 | 15664.1 |
| tonb-dependent receptor | BJD13_RS10205 | Not Available | Negative | 1948475 - 1950844 | 85719.6 |
| glycoside hydrolase family 43 protein | BJD13_RS10210 | Not Available | Positive | 1951102 - 1952787 | 60825.9 |
| response regulator | BJD13_RS10215 | Not Available | Negative | 1952880 - 1954835 | 70439.3 |
| sensor histidine kinase | BJD13_RS10220 | Not Available | Negative | 1954825 - 1955700 | 32275.8 |
| atp-binding protein | BJD13_RS10225 | Not Available | Negative | 1955697 - 1956695 | 34365.1 |
| atp-binding protein | BJD13_RS10230 | Not Available | Negative | 1956698 - 1957093 | 13944.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
