Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS09470 | Not Available | Negative | 1786730 - 1786921 | 6834.94 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | BJD13_RS09475 | Not Available | Positive | 1787050 - 1788063 | 34974.0 |
| 3-hydroxyacyl-acp dehydratase fabz | BJD13_RS09480 | Not Available | Positive | 1788060 - 1788518 | 17065.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | BJD13_RS09485 | Not Available | Positive | 1788544 - 1789335 | 27852.2 |
| lipid-a-disaccharide synthase | BJD13_RS09490 | Not Available | Positive | 1789365 - 1790651 | 46300.4 |
| ribonuclease hii | BJD13_RS09495 | Not Available | Positive | 1790648 - 1791385 | 26732.2 |
| dna polymerase iii subunit alpha | BJD13_RS09500 | Not Available | Positive | 1791603 - 1795193 | 132453.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | BJD13_RS09505 | Not Available | Positive | 1795347 - 1796306 | 35234.6 |
| tetratricopeptide repeat protein | BJD13_RS09510 | Not Available | Positive | 1796364 - 1797119 | 28370.0 |
| nfed family protein | BJD13_RS09515 | Not Available | Positive | 1797144 - 1797658 | 18566.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
