Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase | BJD13_RS09370 | Not Available | Negative | 1763155 - 1763511 | 13364.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BJD13_RS09375 | Not Available | Negative | 1763704 - 1764900 | 41300.5 |
| [protein-pii] uridylyltransferase | BJD13_RS09380 | Not Available | Negative | 1764921 - 1767530 | 97331.3 |
| type i methionyl aminopeptidase | BJD13_RS09385 | Not Available | Negative | 1767527 - 1768303 | 28193.0 |
| spore coat u domain-containing protein | BJD13_RS09390 | Not Available | Positive | 1768594 - 1769145 | 19103.4 |
| molecular chaperone | BJD13_RS09395 | Not Available | Positive | 1769154 - 1769924 | 27132.6 |
| fimbria/pilus outer membrane usher protein | BJD13_RS09400 | Not Available | Positive | 1769941 - 1772292 | 83879.8 |
| spore coat protein u domain-containing protein | BJD13_RS09405 | Not Available | Positive | 1772289 - 1773323 | 35620.8 |
| hypothetical protein | BJD13_RS09410 | Not Available | Positive | 1773372 - 1773704 | 11023.2 |
| molecular chaperone | BJD13_RS09415 | Not Available | Positive | 1773707 - 1774432 | 25720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
