Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BJD13_RS08915 | Not Available | Positive | 1655401 - 1656333 | 33551.6 |
| 2-oxoglutarate dehydrogenase e1 component | BJD13_RS08920 | Not Available | Positive | 1656439 - 1659342 | 106949.0 |
| dihydrolipoyllysine-residue succinyltransferase | BJD13_RS08925 | Not Available | Positive | 1659385 - 1660599 | 42362.7 |
| dihydrolipoyl dehydrogenase | BJD13_RS08930 | Not Available | Positive | 1660711 - 1662153 | 50438.1 |
| tigr00730 family rossman fold protein | BJD13_RS08935 | Not Available | Positive | 1662308 - 1662901 | 21858.5 |
| impact family protein | BJD13_RS08940 | Not Available | Positive | 1663167 - 1663769 | 21329.4 |
| abc transporter transmembrane domain-containing protein | BJD13_RS08945 | Not Available | Positive | 1663766 - 1665535 | 62796.4 |
| hydrogen peroxide-inducible genes activator | BJD13_RS08950 | Not Available | Positive | 1665777 - 1666676 | 32404.7 |
| abc transporter atp-binding protein | BJD13_RS08955 | Not Available | Positive | 1666766 - 1668454 | 61714.6 |
| efflux rnd transporter periplasmic adaptor subunit | BJD13_RS08960 | Not Available | Positive | 1668438 - 1669523 | 39266.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
