Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS08865 | Not Available | Positive | 1644085 - 1645071 | 35422.6 |
| duf4097 family beta strand repeat-containing protein | BJD13_RS08870 | Not Available | Positive | 1645082 - 1645900 | 27996.3 |
| duf2884 family protein | BJD13_RS08875 | Not Available | Positive | 1645929 - 1646465 | 18425.1 |
| hypothetical protein | BJD13_RS08880 | Not Available | Positive | 1646832 - 1647254 | 15514.9 |
| class ii fumarate hydratase | BJD13_RS08885 | Not Available | Negative | 1647384 - 1648790 | 49302.5 |
| hemolysin family protein | BJD13_RS08890 | Not Available | Positive | 1649074 - 1650396 | 48645.3 |
| cap domain-containing protein | BJD13_RS08895 | Not Available | Negative | 1650407 - 1651357 | 34723.1 |
| adenylosuccinate lyase | BJD13_RS08900 | Not Available | Positive | 1651554 - 1652921 | 49830.5 |
| duf3060 domain-containing protein | BJD13_RS08905 | Not Available | Positive | 1653165 - 1653665 | 17315.4 |
| cupin domain-containing protein | BJD13_RS08910 | Not Available | Positive | 1653911 - 1655404 | 54873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
