Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase n-terminal domain-containing protein | BJD13_RS08650 | Not Available | Negative | 1600688 - 1601386 | 24956.8 |
| enoyl-coa hydratase-related protein | BJD13_RS08655 | Not Available | Positive | 1601550 - 1602332 | 27788.0 |
| hypothetical protein | BJD13_RS08660 | Not Available | Positive | 1602340 - 1602720 | 13613.4 |
| endonuclease iii | BJD13_RS08665 | Not Available | Positive | 1602717 - 1603427 | 26264.9 |
| sulp family inorganic anion transporter | BJD13_RS08670 | Not Available | Negative | 1603627 - 1605195 | 54853.1 |
| carbonic anhydrase | BJD13_RS08675 | Not Available | Negative | 1605207 - 1605887 | 24902.8 |
| hypothetical protein | BJD13_RS08680 | Not Available | Negative | 1606002 - 1606322 | 11496.5 |
| opro/oprp family phosphate-selective porin | BJD13_RS08685 | Not Available | Positive | 1606660 - 1607910 | 45372.8 |
| phosphate abc transporter substrate-binding protein psts | BJD13_RS08690 | Not Available | Positive | 1608101 - 1609120 | 35659.5 |
| phosphate abc transporter substrate-binding protein psts | BJD13_RS08695 | Not Available | Positive | 1609467 - 1610558 | 37709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
