Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | BJD13_RS25220 | Not Available | Positive | 1521169 - 1521338 | 6193.45 |
| marr family winged helix-turn-helix transcriptional regulator | BJD13_RS08255 | Not Available | Positive | 1521381 - 1521845 | 16681.8 |
| fad-dependent monooxygenase | BJD13_RS08260 | Not Available | Positive | 1521881 - 1523071 | 43062.9 |
| methyl-accepting chemotaxis protein | BJD13_RS08265 | Not Available | Positive | 1523340 - 1525451 | 76478.1 |
| duf488 family protein | BJD13_RS08270 | Not Available | Negative | 1525524 - 1526129 | 22311.6 |
| Trna-ser | Not Available | Not Available | Positive | 1526482 - 1526571 | Not Available |
| lysr family transcriptional regulator | BJD13_RS08280 | Not Available | Negative | 1526940 - 1527956 | 37543.3 |
| fmn-dependent nadh-azoreductase | BJD13_RS08285 | Not Available | Positive | 1528057 - 1528641 | 20744.5 |
| serine--trna ligase | BJD13_RS08290 | Not Available | Negative | 1528963 - 1530243 | 47274.3 |
| energy transducer tonb | BJD13_RS08295 | Not Available | Positive | 1530355 - 1531026 | 23053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
