Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | BJD13_RS08100 | Not Available | Negative | 1490915 - 1492150 | 43510.5 |
| class i sam-dependent methyltransferase | BJD13_RS08105 | Not Available | Negative | 1492163 - 1493005 | 31369.7 |
| wzz/fepe/etk n-terminal domain-containing protein | BJD13_RS08110 | Not Available | Negative | 1493289 - 1494140 | 31150.5 |
| hypothetical protein | BJD13_RS08115 | Not Available | Negative | 1494184 - 1495317 | 41022.4 |
| glycosyltransferase | BJD13_RS08120 | Not Available | Negative | 1495314 - 1496264 | 35494.6 |
| o-antigen translocase | BJD13_RS08125 | Not Available | Negative | 1496261 - 1497514 | 45115.6 |
| degt/dnrj/eryc1/strs family aminotransferase | BJD13_RS08130 | Not Available | Negative | 1497511 - 1498635 | 40665.1 |
| gnat family n-acetyltransferase | BJD13_RS08135 | Not Available | Negative | 1498623 - 1499534 | 33831.7 |
| hypothetical protein | BJD13_RS08140 | Not Available | Negative | 1499542 - 1500495 | 35199.8 |
| acetyltransferase | BJD13_RS08145 | Not Available | Negative | 1500499 - 1501170 | 24618.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
