Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BJD13_RS07840 | Not Available | Negative | 1438095 - 1440053 | 71425.2 |
| Trna-ser | Not Available | Not Available | Positive | 1441194 - 1441286 | Not Available |
| carbon storage regulator csra | BJD13_RS07855 | Not Available | Negative | 1441371 - 1441583 | 7566.06 |
| alanine--trna ligase | BJD13_RS07860 | Not Available | Negative | 1441723 - 1444371 | 95194.7 |
| recombination regulator recx | BJD13_RS07865 | Not Available | Negative | 1444473 - 1444961 | 18143.2 |
| hypothetical protein | BJD13_RS07870 | Not Available | Positive | 1444978 - 1445241 | 9380.95 |
| recombinase reca | BJD13_RS07875 | Not Available | Negative | 1445259 - 1446293 | 37177.9 |
| transcriptional repressor lexa | BJD13_RS07880 | Not Available | Negative | 1446466 - 1447107 | 23198.9 |
| 2-polyprenylphenol 6-hydroxylase | BJD13_RS07885 | Not Available | Negative | 1447196 - 1448872 | 62018.6 |
| cina family protein | BJD13_RS07890 | Not Available | Negative | 1449340 - 1449834 | 17125.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
