Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS06955 | Not Available | Negative | 1229142 - 1229591 | 16518.9 |
| long-chain fatty acid--coa ligase | BJD13_RS06960 | Not Available | Positive | 1229689 - 1231371 | 61515.9 |
| crotonase/enoyl-coa hydratase family protein | BJD13_RS06965 | Not Available | Positive | 1231548 - 1232417 | 31678.5 |
| atp-binding protein | BJD13_RS06970 | Not Available | Negative | 1232430 - 1234610 | 79352.2 |
| hypothetical protein | BJD13_RS06975 | Not Available | Negative | 1234618 - 1235247 | 22785.5 |
| hd-gyp domain-containing protein | BJD13_RS06980 | Not Available | Negative | 1235249 - 1236385 | 42159.0 |
| lysine--trna ligase | BJD13_RS06985 | Not Available | Negative | 1236526 - 1238043 | 56884.8 |
| peptide chain release factor 2 | BJD13_RS06990 | Not Available | Negative | 1238247 - 1239372 | 41753.8 |
| lyttr family dna-binding domain-containing protein | BJD13_RS06995 | Not Available | Negative | 1239620 - 1240567 | 35050.6 |
| acyltransferase family protein | BJD13_RS07000 | Not Available | Positive | 1240727 - 1241941 | 46128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
