Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | BJD13_RS24950 | Not Available | Positive | 1196660 - 1196952 | 10181.2 |
| methyl-accepting chemotaxis protein | BJD13_RS06860 | Not Available | Positive | 1197146 - 1199395 | 79855.7 |
| methyl-accepting chemotaxis protein | BJD13_RS06865 | Not Available | Positive | 1199503 - 1201977 | 87899.9 |
| methyl-accepting chemotaxis protein | BJD13_RS06870 | Not Available | Positive | 1202562 - 1204823 | 80166.4 |
| methyl-accepting chemotaxis protein | BJD13_RS06875 | Not Available | Positive | 1205031 - 1207292 | 79592.8 |
| cache 3/cache 2 fusion domain-containing protein | BJD13_RS06880 | Not Available | Positive | 1207940 - 1210609 | 95148.3 |
| flagellar brake protein | BJD13_RS06890 | Not Available | Positive | 1211231 - 1212016 | 29676.4 |
| chemotaxis protein chew | BJD13_RS06895 | Not Available | Positive | 1212151 - 1212633 | 17623.1 |
| hypothetical protein | BJD13_RS06900 | Not Available | Positive | 1213086 - 1213469 | 13712.8 |
| methyl-accepting chemotaxis protein | BJD13_RS06905 | Not Available | Positive | 1213553 - 1215934 | 84616.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
