Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BJD13_RS06805 | Not Available | Positive | 1173828 - 1176113 | 80784.0 |
| methyl-accepting chemotaxis protein | BJD13_RS06810 | Not Available | Positive | 1176423 - 1178696 | 79648.0 |
| hypothetical protein | BJD13_RS06815 | Not Available | Positive | 1179020 - 1179553 | 19186.7 |
| methyl-accepting chemotaxis protein | BJD13_RS06820 | Not Available | Positive | 1180094 - 1182271 | 76920.6 |
| methyl-accepting chemotaxis protein | BJD13_RS06825 | Not Available | Positive | 1182338 - 1185127 | 99228.7 |
| transporter | BJD13_RS06830 | Not Available | Positive | 1185428 - 1186189 | 27307.0 |
| methyl-accepting chemotaxis protein | BJD13_RS06835 | Not Available | Positive | 1186203 - 1188575 | 83223.5 |
| methyl-accepting chemotaxis protein | BJD13_RS06840 | Not Available | Positive | 1188797 - 1191055 | 80792.1 |
| methyl-accepting chemotaxis protein | BJD13_RS06845 | Not Available | Positive | 1191556 - 1193814 | 79821.1 |
| methyl-accepting chemotaxis protein | BJD13_RS06850 | Not Available | Positive | 1194392 - 1196503 | 74289.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
