Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | BJD13_RS06755 | Not Available | Negative | 1160517 - 1161599 | 42118.6 |
| hypothetical protein | BJD13_RS24605 | Not Available | Negative | 1161596 - 1162183 | 22523.0 |
| tonb-dependent receptor | BJD13_RS06760 | Not Available | Negative | 1163028 - 1166183 | 115020.0 |
| flagellar motor protein | BJD13_RS06770 | Not Available | Positive | 1166992 - 1167732 | 26375.7 |
| flagellar motor protein motd | BJD13_RS06775 | Not Available | Positive | 1167739 - 1168713 | 34387.0 |
| para family protein | BJD13_RS06780 | Not Available | Positive | 1168715 - 1169497 | 27716.7 |
| chemotaxis protein chew | BJD13_RS06785 | Not Available | Positive | 1169494 - 1170768 | 43372.3 |
| lipid asymmetry maintenance protein mlab | BJD13_RS06790 | Not Available | Positive | 1170871 - 1171179 | 10846.8 |
| response regulator | BJD13_RS06795 | Not Available | Positive | 1171176 - 1171541 | 12991.8 |
| chemotaxis protein chea | BJD13_RS06800 | Not Available | Positive | 1171575 - 1173584 | 71115.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
