Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | BJD13_RS06645 | Not Available | Positive | 1137526 - 1139613 | 75328.7 |
| flagellar biosynthesis protein flhb | BJD13_RS06650 | Not Available | Positive | 1139760 - 1140890 | 41263.0 |
| flagellar biosynthesis protein flha | BJD13_RS06655 | Not Available | Positive | 1140908 - 1142980 | 73616.0 |
| flagellar biosynthesis protein flhf | BJD13_RS06660 | Not Available | Positive | 1143654 - 1145354 | 60355.2 |
| mind/para family protein | BJD13_RS06665 | Not Available | Positive | 1145341 - 1146225 | 31646.4 |
| rna polymerase sigma factor flia | BJD13_RS06670 | Not Available | Positive | 1146222 - 1146989 | 27990.2 |
| chemotaxis response regulator chey | BJD13_RS06675 | Not Available | Positive | 1147025 - 1147417 | 14341.6 |
| protein phosphatase chez | BJD13_RS06680 | Not Available | Positive | 1147417 - 1148043 | 22742.0 |
| chemotaxis protein chea | BJD13_RS06685 | Not Available | Positive | 1148046 - 1149704 | 59389.7 |
| hypothetical protein | BJD13_RS06690 | Not Available | Negative | 1150317 - 1150835 | 18498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
