Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | BJD13_RS06590 | Not Available | Positive | 1125691 - 1126242 | 19612.9 |
| flagellar motor switch protein flim | BJD13_RS06595 | Not Available | Positive | 1126253 - 1127266 | 37835.5 |
| flagellar motor switch protein flin | BJD13_RS06600 | Not Available | Positive | 1127263 - 1127601 | 12272.7 |
| flagellar biosynthetic protein flio | BJD13_RS06605 | Not Available | Positive | 1127598 - 1128005 | 13822.3 |
| flagellar type iii secretion system pore protein flip | BJD13_RS06610 | Not Available | Positive | 1128007 - 1128852 | 29960.9 |
| hypothetical protein | BJD13_RS24600 | Not Available | Positive | 1129069 - 1129374 | 11119.1 |
| flagellar biosynthetic protein fliq | BJD13_RS06620 | Not Available | Positive | 1129727 - 1129996 | 9276.84 |
| flagellar biosynthetic protein flir | BJD13_RS06625 | Not Available | Positive | 1130010 - 1130801 | 27491.5 |
| diguanylate cyclase domain-containing protein | BJD13_RS06630 | Not Available | Positive | 1131033 - 1133954 | 107415.0 |
| ligand-binding sensor domain-containing diguanylate cyclase | BJD13_RS06640 | Not Available | Positive | 1134334 - 1137255 | 107641.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
