Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chev | BJD13_RS06390 | Not Available | Positive | 1084467 - 1085411 | 34339.3 |
| flagellar basal body rod protein flgb | BJD13_RS06395 | Not Available | Positive | 1085750 - 1086151 | 14258.6 |
| flagellar basal body rod protein flgc | BJD13_RS06400 | Not Available | Positive | 1086155 - 1086562 | 14392.0 |
| flagellar hook capping flgd n-terminal domain-containing protein | BJD13_RS06405 | Not Available | Positive | 1086600 - 1087265 | 22745.7 |
| flagellar hook protein flge | BJD13_RS06410 | Not Available | Positive | 1087297 - 1088520 | 42764.2 |
| flagellar basal-body rod protein flgf | BJD13_RS06415 | Not Available | Positive | 1088665 - 1089420 | 26481.3 |
| nfed family protein | BJD13_RS25375 | Not Available | Positive | 1089596 - 1089927 | 11732.7 |
| flagellar basal-body rod protein flgg | BJD13_RS06425 | Not Available | Positive | 1090195 - 1090980 | 27391.1 |
| flagellar basal body l-ring protein flgh | BJD13_RS06430 | Not Available | Positive | 1091019 - 1091711 | 23712.4 |
| flagellar basal body p-ring protein flgi | BJD13_RS06435 | Not Available | Positive | 1091722 - 1092840 | 37621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
